Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 MFSD8-242ENST00000641690 4199 ntBASIC2.1□□□□□ -2.07
RPS28P62857 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 RNA5SP258-201ENST00000362750 119 ntBASIC2.1□□□□□ -2.07
RPS28P62857 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
RPS28P62857 AL591848.1-201ENST00000413092 322 ntBASIC2.1□□□□□ -2.07
RPS28P62857 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 AC096632.1-201ENST00000427395 310 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.1□□□□□ -2.07
RPS28P62857 VDAC2P3-201ENST00000430995 828 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 MED27-204ENST00000474263 762 ntTSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 AC026979.1-201ENST00000492525 396 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC107956.2-201ENST00000496042 454 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 OR5M14P-201ENST00000506803 618 ntBASIC2.1□□□□□ -2.07
RPS28P62857 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 RN7SKP43-201ENST00000516173 320 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 CARSP2-201ENST00000520688 277 ntBASIC2.1□□□□□ -2.07
RPS28P62857 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.1□□□□□ -2.07
RPS28P62857 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 APPL2-203ENST00000546731 684 ntTSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 HSPE1P5-201ENST00000561489 272 ntBASIC2.1□□□□□ -2.07
RPS28P62857 MIR4446-201ENST00000578505 67 ntBASIC2.1□□□□□ -2.07
RPS28P62857 MIR1273F-201ENST00000580581 99 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC090616.3-201ENST00000582184 217 ntBASIC2.1□□□□□ -2.07
RPS28P62857 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 AP001120.4-201ENST00000590231 108 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC010615.3-201ENST00000597319 394 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 AL161756.2-201ENST00000604597 246 ntBASIC2.1□□□□□ -2.07
RPS28P62857 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.1□□□□□ -2.07
RPS28P62857 U91328.4-201ENST00000608919 517 ntBASIC2.1□□□□□ -2.07
RPS28P62857 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 AL355810.1-201ENST00000614629 552 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC2.1□□□□□ -2.07
RPS28P62857 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 AC022149.2-201ENST00000621061 203 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC124312.6-202ENST00000623624 418 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AC016717.3-201ENST00000624730 554 ntBASIC2.1□□□□□ -2.07
RPS28P62857 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC2.1□□□□□ -2.07
RPS28P62857 AL732372.2-225ENST00000642124 456 ntBASIC2.1□□□□□ -2.07
RPS28P62857 AL049781.1-201ENST00000623195 3585 ntBASIC2.1□□□□□ -2.07
RPS28P62857 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.1□□□□□ -2.07
RPS28P62857 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
RPS28P62857 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.09□□□□□ -2.07
RPS28P62857 RNA5SP42-201ENST00000364278 115 ntBASIC2.09□□□□□ -2.07
RPS28P62857 SNORA62-201ENST00000365493 153 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 SET-203ENST00000372688 801 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 SNORA67-201ENST00000384423 137 ntBASIC2.09□□□□□ -2.07
RPS28P62857 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RPS28P62857 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 IFNA12P-201ENST00000413147 571 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 AC068533.1-201ENST00000418542 415 ntBASIC2.09□□□□□ -2.07
RPS28P62857 TMEM167AP1-201ENST00000423409 219 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC073508.1-201ENST00000428866 656 ntBASIC2.09□□□□□ -2.07
RPS28P62857 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.09□□□□□ -2.07
RPS28P62857 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 ST13P2-201ENST00000438916 1109 ntBASIC2.09□□□□□ -2.07
RPS28P62857 RPS15AP7-201ENST00000439294 405 ntBASIC2.09□□□□□ -2.07
RPS28P62857 YWHAZP2-201ENST00000440317 728 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC009296.1-201ENST00000443146 155 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 SNRPGP6-201ENST00000451124 220 ntBASIC2.09□□□□□ -2.07
RPS28P62857 CBX5P1-201ENST00000468470 561 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC090525.1-201ENST00000479116 478 ntBASIC2.09□□□□□ -2.07
RPS28P62857 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RPS28P62857 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.09□□□□□ -2.07
RPS28P62857 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC2.09□□□□□ -2.07
RPS28P62857 AC023424.2-201ENST00000493479 777 ntBASIC2.09□□□□□ -2.07
RPS28P62857 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC2.09□□□□□ -2.07
RPS28P62857 SETP14-201ENST00000497538 873 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms