Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.37□□□□□ -1.71
RPS3AP61247 MTCO2P15-201ENST00000532655 656 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.37□□□□□ -1.71
RPS3AP61247 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC091042.1-201ENST00000579213 173 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 MIR4737-201ENST00000583979 81 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC091057.2-201ENST00000602594 792 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 MRPS35P3-201ENST00000603189 709 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC010424.2-201ENST00000607594 443 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 AC007349.4-201ENST00000608114 532 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.37□□□□□ -1.71
RPS3AP61247 MIR4727-201ENST00000622232 55 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 AC012414.7-202ENST00000622705 1090 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 AP002782.1-201ENST00000623107 614 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 AC006927.4-201ENST00000639187 543 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.37□□□□□ -1.71
RPS3AP61247 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RPS3AP61247 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RPS3AP61247 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPS3AP61247 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
RPS3AP61247 AC105074.1-201ENST00000623380 3095 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 CDR1-202ENST00000625883 1485 ntBASIC4.37□□□□□ -1.71
RPS3AP61247 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 MTCO1P24-201ENST00000515438 1558 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 AC016588.2-201ENST00000632484 3021 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
RPS3AP61247 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 RNU6-216P-201ENST00000363282 104 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.36□□□□□ -1.71
RPS3AP61247 RNA5SP87-201ENST00000384155 118 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 MIR513A2-201ENST00000385249 127 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 HSPD1P16-201ENST00000402302 394 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 MIR1250-201ENST00000408098 113 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 RNA5SP113-201ENST00000410486 84 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.36□□□□□ -1.71
RPS3AP61247 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 RPL22P18-201ENST00000417197 377 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 RWDD4P2-201ENST00000426392 563 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL360081.1-201ENST00000428299 555 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.36□□□□□ -1.71
RPS3AP61247 USP9YP9-201ENST00000429406 715 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.36□□□□□ -1.71
RPS3AP61247 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.36□□□□□ -1.71
RPS3AP61247 H2AFZP5-201ENST00000446960 382 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC000111.2-201ENST00000448200 210 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC009963.2-201ENST00000453431 138 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 RPS5P7-201ENST00000456664 608 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 USP9YP25-201ENST00000457708 443 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 RPL23AP56-201ENST00000460778 453 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.36□□□□□ -1.71
RPS3AP61247 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.36□□□□□ -1.71
RPS3AP61247 IGKV1-32-201ENST00000519290 311 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 OR4G1P-201ENST00000588632 938 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.36□□□□□ -1.71
RPS3AP61247 AC234772.3-201ENST00000602277 528 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC022022.2-201ENST00000602989 360 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC098935.2-201ENST00000604222 466 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL121932.1-201ENST00000605542 214 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL513477.2-201ENST00000607858 568 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AL451074.6-201ENST00000608512 729 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC063944.3-201ENST00000609969 533 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RPS3AP61247 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.36□□□□□ -1.71
RPS3AP61247 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.36□□□□□ -1.71
RPS3AP61247 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 AC130650.2-201ENST00000618736 2403 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC007390.2-201ENST00000606229 3803 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 NCLP2-201ENST00000416078 1462 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 AC025031.4-201ENST00000621248 3271 ntBASIC4.36□□□□□ -1.71
RPS3AP61247 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPS3AP61247 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.35□□□□□ -1.71
RPS3AP61247 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPS3AP61247 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.35□□□□□ -1.71
RPS3AP61247 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.35□□□□□ -1.71
RPS3AP61247 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPS3AP61247 RNU1-130P-201ENST00000363930 160 ntBASIC4.35□□□□□ -1.71
RPS3AP61247 RNU4-28P-201ENST00000364739 141 ntBASIC4.35□□□□□ -1.71
RPS3AP61247 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.35□□□□□ -1.71
RPS3AP61247 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms