Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.62□□□□□ -1.99
FOXA3P55318 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.62□□□□□ -1.99
FOXA3P55318 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 NPM1P49-201ENST00000448027 714 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 U3.44-201ENST00000458938 192 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 AC093840.1-201ENST00000511599 336 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 SCARNA14-201ENST00000516903 136 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 AC107934.2-201ENST00000518653 310 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 MTCO1P49-201ENST00000523429 802 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 PTP4A1P6-201ENST00000531034 478 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 TRAV37-201ENST00000553906 342 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 OR4U1P-201ENST00000554958 912 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC2.62□□□□□ -1.99
FOXA3P55318 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.62□□□□□ -1.99
FOXA3P55318 ZNF33CP-201ENST00000432492 2030 ntBASIC2.62□□□□□ -1.99
FOXA3P55318 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
FOXA3P55318 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXA3P55318 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
FOXA3P55318 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
FOXA3P55318 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
FOXA3P55318 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA3P55318 AL157700.1-201ENST00000561973 1432 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXA3P55318 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 OR4A15-201ENST00000314706 1035 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXA3P55318 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
FOXA3P55318 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
FOXA3P55318 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
FOXA3P55318 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 CYB5AP4-201ENST00000396692 399 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 MTND2P16-201ENST00000419987 799 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC245054.1-201ENST00000420944 258 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 AL592293.2-201ENST00000422292 996 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 TRGV7-201ENST00000427089 353 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 RPS27AP12-201ENST00000429552 465 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 NUTF2P3-201ENST00000448540 384 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA3P55318 RPL7P5-201ENST00000471472 736 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC092185.1-201ENST00000491371 97 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 OR4A2P-201ENST00000527276 913 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
FOXA3P55318 MED28P5-201ENST00000528254 438 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 AL163153.1-201ENST00000554223 283 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA3P55318 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 AC022884.3-201ENST00000579571 248 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.61□□□□□ -1.99
FOXA3P55318 AC010928.3-201ENST00000587712 541 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC2.61□□□□□ -1.99
FOXA3P55318 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.61□□□□□ -1.99
FOXA3P55318 AL161912.3-201ENST00000605404 628 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 RNU4-89P-201ENST00000607443 133 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AL355816.1-201ENST00000607951 118 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC112503.1-201ENST00000608436 391 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AL445567.2-201ENST00000618935 498 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AP003355.3-201ENST00000623465 114 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AL355480.1-201ENST00000629041 99 ntBASIC2.61□□□□□ -1.99
FOXA3P55318 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.61□□□□□ -1.99
FOXA3P55318 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXA3P55318 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA3P55318 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
FOXA3P55318 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
FOXA3P55318 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA3P55318 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA3P55318 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.6□□□□□ -1.99
FOXA3P55318 MIR192-201ENST00000384915 110 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 RPL7P60-201ENST00000397636 735 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 RPL23AP47-201ENST00000408017 460 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA3P55318 RBMY2KP-201ENST00000418221 992 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXA3P55318 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA3P55318 HMGN2P20-201ENST00000437531 273 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 AL662791.1-201ENST00000441992 928 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA3P55318 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA3P55318 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA3P55318 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXA3P55318 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
FOXA3P55318 RPL23AP12-201ENST00000467573 473 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 RPL31P13-201ENST00000484151 370 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 AC108078.3-201ENST00000502633 489 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 HMGB3P15-201ENST00000507326 574 ntBASIC2.6□□□□□ -1.99
FOXA3P55318 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXA3P55318 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXA3P55318 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms