Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
NEK3P51956 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.98□□□□□ -1.61
NEK3P51956 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 AP000542.2-201ENST00000623199 6179 ntBASIC4.97□□□□□ -1.61
NEK3P51956 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 DDX43P2-201ENST00000604753 1354 ntBASIC4.97□□□□□ -1.61
NEK3P51956 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 OR56B2P-201ENST00000317102 954 ntBASIC4.97□□□□□ -1.61
NEK3P51956 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
NEK3P51956 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NEK3P51956 RNU6-1279P-201ENST00000383917 103 ntBASIC4.97□□□□□ -1.61
NEK3P51956 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NEK3P51956 ARF4P3-201ENST00000397387 509 ntBASIC4.97□□□□□ -1.61
NEK3P51956 EIF5P1-201ENST00000400019 1231 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 AC069213.2-201ENST00000420238 366 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 AC073335.1-201ENST00000427776 363 ntBASIC4.97□□□□□ -1.61
NEK3P51956 USP9YP9-201ENST00000429406 715 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.97□□□□□ -1.61
NEK3P51956 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 VN1R40P-201ENST00000455196 941 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AL109741.2-201ENST00000455561 343 ntBASIC4.97□□□□□ -1.61
NEK3P51956 RPL5P30-201ENST00000465511 891 ntBASIC4.97□□□□□ -1.61
NEK3P51956 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 AC093767.1-201ENST00000504523 156 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC021146.8-201ENST00000507455 733 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 AC005798.1-201ENST00000513715 387 ntBASIC4.97□□□□□ -1.61
NEK3P51956 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.97□□□□□ -1.61
NEK3P51956 OR4R3P-201ENST00000525084 838 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AP000926.4-201ENST00000527351 454 ntBASIC4.97□□□□□ -1.61
NEK3P51956 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 AC021171.1-201ENST00000603137 706 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC104785.1-201ENST00000603220 588 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC020910.3-201ENST00000603701 874 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 AC097505.1-201ENST00000610199 565 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AL136295.6-201ENST00000610486 658 ntBASIC4.97□□□□□ -1.61
NEK3P51956 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.97□□□□□ -1.61
NEK3P51956 AP003485.2-201ENST00000623636 610 ntBASIC4.97□□□□□ -1.61
NEK3P51956 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 U6.101-201ENST00000637707 76 ntBASIC4.97□□□□□ -1.61
NEK3P51956 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 MTND5P3-201ENST00000438536 1800 ntBASIC4.97□□□□□ -1.61
NEK3P51956 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.97□□□□□ -1.61
NEK3P51956 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NEK3P51956 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.97□□□□□ -1.61
NEK3P51956 SAMMSON-226ENST00000642089 1582 ntBASIC4.96□□□□□ -1.62
NEK3P51956 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 FAM3C2-201ENST00000312214 681 ntBASIC4.96□□□□□ -1.62
NEK3P51956 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 ATP5F1P2-201ENST00000398143 760 ntBASIC4.96□□□□□ -1.62
NEK3P51956 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 VPS26BP1-201ENST00000417155 755 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.96□□□□□ -1.62
NEK3P51956 AC005517.2-201ENST00000424673 553 ntBASIC4.96□□□□□ -1.62
NEK3P51956 MTND5P25-201ENST00000430499 799 ntBASIC4.96□□□□□ -1.62
NEK3P51956 RPL7P34-201ENST00000433316 712 ntBASIC4.96□□□□□ -1.62
NEK3P51956 NMNAT1P2-201ENST00000435192 860 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.96□□□□□ -1.62
NEK3P51956 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 USP9YP34-201ENST00000453983 808 ntBASIC4.96□□□□□ -1.62
NEK3P51956 RN7SL517P-201ENST00000462240 305 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AL136126.1-201ENST00000473603 402 ntBASIC4.96□□□□□ -1.62
NEK3P51956 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 AC006499.2-201ENST00000513470 337 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 RNA5SP216-201ENST00000516111 123 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.96□□□□□ -1.62
NEK3P51956 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 DEFB109D-201ENST00000529497 240 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms