Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 COX6CP15-201ENST00000426313 211 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC092017.2-201ENST00000427600 362 ntBASIC3.9□□□□□ -1.79
SOX3P41225 RPS27AP12-201ENST00000429552 465 ntBASIC3.9□□□□□ -1.79
SOX3P41225 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.9□□□□□ -1.79
SOX3P41225 RPL21P110-201ENST00000433345 446 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AL035246.1-201ENST00000433554 1255 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.9□□□□□ -1.79
SOX3P41225 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 FGF7P3-201ENST00000454645 303 ntBASIC3.9□□□□□ -1.79
SOX3P41225 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
SOX3P41225 RN7SL585P-201ENST00000470538 280 ntBASIC3.9□□□□□ -1.79
SOX3P41225 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 RPS29P19-201ENST00000479709 171 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC104164.2-201ENST00000496953 495 ntBASIC3.9□□□□□ -1.79
SOX3P41225 RPS27AP13-201ENST00000498403 237 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC108145.1-201ENST00000503770 153 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.9□□□□□ -1.79
SOX3P41225 MTCO3P15-201ENST00000526563 574 ntBASIC3.9□□□□□ -1.79
SOX3P41225 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.9□□□□□ -1.79
SOX3P41225 AC139103.1-201ENST00000534696 1030 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.9□□□□□ -1.79
SOX3P41225 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.9□□□□□ -1.79
SOX3P41225 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 NIFKP8-201ENST00000560500 874 ntBASIC3.9□□□□□ -1.79
SOX3P41225 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SOX3P41225 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 AC068790.5-201ENST00000602741 355 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC002487.1-201ENST00000604565 994 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC010975.3-201ENST00000618727 978 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC109454.4-201ENST00000623411 649 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AC067931.1-201ENST00000624190 671 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AL109659.3-201ENST00000624985 950 ntBASIC3.9□□□□□ -1.79
SOX3P41225 AP001002.2-201ENST00000625137 386 ntBASIC3.9□□□□□ -1.79
SOX3P41225 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.9□□□□□ -1.79
SOX3P41225 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX3P41225 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SOX3P41225 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.9□□□□□ -1.79
SOX3P41225 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SOX3P41225 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SOX3P41225 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX3P41225 AL049737.1-201ENST00000413920 1403 ntBASIC3.89□□□□□ -1.79
SOX3P41225 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 AL512646.1-201ENST00000269395 1077 ntBASIC3.89□□□□□ -1.79
SOX3P41225 RN7SKP227-201ENST00000364445 330 ntBASIC3.89□□□□□ -1.79
SOX3P41225 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SOX3P41225 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SOX3P41225 SNORA51.12-201ENST00000384448 134 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AL022722.2-201ENST00000402519 180 ntBASIC3.89□□□□□ -1.79
SOX3P41225 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX3P41225 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX3P41225 AL161631.1-201ENST00000417933 486 ntBASIC3.89□□□□□ -1.79
SOX3P41225 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC092648.1-201ENST00000425870 423 ntBASIC3.89□□□□□ -1.79
SOX3P41225 IPMKP1-201ENST00000425988 855 ntBASIC3.89□□□□□ -1.79
SOX3P41225 RPL7P4-203ENST00000430239 730 ntBASIC3.89□□□□□ -1.79
SOX3P41225 GSTA7P-201ENST00000438425 448 ntBASIC3.89□□□□□ -1.79
SOX3P41225 HMGB3P6-201ENST00000444896 598 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC114755.5-201ENST00000447760 831 ntBASIC3.89□□□□□ -1.79
SOX3P41225 NPM1P13-201ENST00000452663 865 ntBASIC3.89□□□□□ -1.79
SOX3P41225 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SOX3P41225 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX3P41225 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX3P41225 AF213884.1-201ENST00000488102 463 ntBASIC3.89□□□□□ -1.79
SOX3P41225 UBA52P3-201ENST00000491303 382 ntBASIC3.89□□□□□ -1.79
SOX3P41225 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.89□□□□□ -1.79
SOX3P41225 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 PGBD4P4-201ENST00000509673 613 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC099522.1-202ENST00000514718 367 ntBASIC3.89□□□□□ -1.79
SOX3P41225 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SOX3P41225 AC105233.3-201ENST00000531125 744 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 OR8K4P-201ENST00000534608 872 ntBASIC3.89□□□□□ -1.79
SOX3P41225 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX3P41225 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SOX3P41225 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX3P41225 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.89□□□□□ -1.79
SOX3P41225 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.89□□□□□ -1.79
SOX3P41225 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC009974.1-201ENST00000608881 455 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.89□□□□□ -1.79
SOX3P41225 AC123768.4-201ENST00000616244 701 ntBASIC3.89□□□□□ -1.79
SOX3P41225 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.89□□□□□ -1.79
SOX3P41225 AC068831.8-201ENST00000620171 435 ntBASIC3.89□□□□□ -1.79
SOX3P41225 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
SOX3P41225 AC008785.1-201ENST00000624475 456 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms