Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNFP41002 AL096712.1-201ENST00000614561 159 ntBASIC5.68□□□□□ -1.5
CCNFP41002 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.68□□□□□ -1.5
CCNFP41002 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNFP41002 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCNFP41002 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCNFP41002 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.68□□□□□ -1.5
CCNFP41002 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNFP41002 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.67□□□□□ -1.5
CCNFP41002 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNFP41002 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNFP41002 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC024560.2-201ENST00000507981 1497 ntBASIC5.67□□□□□ -1.5
CCNFP41002 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.67□□□□□ -1.5
CCNFP41002 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 RNU6-1103P-201ENST00000384150 107 ntBASIC5.67□□□□□ -1.5
CCNFP41002 NUP35P2-201ENST00000416748 943 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC009302.1-201ENST00000417147 390 ntBASIC5.67□□□□□ -1.5
CCNFP41002 ZNF90P2-204ENST00000419323 1075 ntBASIC5.67□□□□□ -1.5
CCNFP41002 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNFP41002 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNFP41002 USP9YP9-201ENST00000429406 715 ntBASIC5.67□□□□□ -1.5
CCNFP41002 TMEM183AP1-205ENST00000432739 290 ntBASIC5.67□□□□□ -1.5
CCNFP41002 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNFP41002 AC093019.1-201ENST00000443135 252 ntBASIC5.67□□□□□ -1.5
CCNFP41002 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNFP41002 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.67□□□□□ -1.5
CCNFP41002 RPS23P2-201ENST00000463671 415 ntBASIC5.67□□□□□ -1.5
CCNFP41002 ATP5LP5-201ENST00000483050 299 ntBASIC5.67□□□□□ -1.5
CCNFP41002 RNA5SP271-201ENST00000516700 88 ntBASIC5.67□□□□□ -1.5
CCNFP41002 LSM6P2-201ENST00000552208 177 ntBASIC5.67□□□□□ -1.5
CCNFP41002 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNFP41002 AC096996.1-201ENST00000563813 325 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC093591.2-201ENST00000565254 3843 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNFP41002 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNFP41002 RPL12P25-202ENST00000598100 674 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.67□□□□□ -1.5
CCNFP41002 NRBF2P5-201ENST00000603087 788 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AL391646.1-201ENST00000603860 190 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AL009028.1-201ENST00000604895 802 ntBASIC5.67□□□□□ -1.5
CCNFP41002 COX6CP4-201ENST00000605798 228 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC019193.2-201ENST00000610012 634 ntBASIC5.67□□□□□ -1.5
CCNFP41002 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.67□□□□□ -1.5
CCNFP41002 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.67□□□□□ -1.5
CCNFP41002 AC010149.2-201ENST00000637608 315 ntBASIC5.67□□□□□ -1.5
CCNFP41002 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCNFP41002 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CCNFP41002 AC025574.1-201ENST00000554784 1653 ntBASIC5.66□□□□□ -1.5
CCNFP41002 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.66□□□□□ -1.5
CCNFP41002 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCNFP41002 RNU1-150P-201ENST00000362491 162 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RN7SKP15-201ENST00000364742 309 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RNU6-282P-201ENST00000365357 103 ntBASIC5.66□□□□□ -1.5
CCNFP41002 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 MIR649-201ENST00000384843 97 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AC016769.3-201ENST00000396562 315 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RPS3AP2-201ENST00000407190 754 ntBASIC5.66□□□□□ -1.5
CCNFP41002 AL023807.1-201ENST00000407932 359 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RN7SKP29-201ENST00000410957 272 ntBASIC5.66□□□□□ -1.5
CCNFP41002 RNU6-603P-201ENST00000411403 107 ntBASIC5.66□□□□□ -1.5
CCNFP41002 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.66□□□□□ -1.5
CCNFP41002 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCNFP41002 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms