Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC8P31273 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 MRPL35P4-201ENST00000453682 566 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 DUXAP8-207ENST00000456786 622 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 RPL7L1P8-201ENST00000469911 741 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 RPS17P11-201ENST00000474297 293 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 RPS4XP6-201ENST00000477670 797 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC110792.1-201ENST00000491826 472 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 HMGB1P21-201ENST00000502313 581 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC069306.1-201ENST00000507006 843 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 OR5H4P-201ENST00000510851 923 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 AC008494.2-201ENST00000514544 370 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 MTND2P32-201ENST00000521584 1038 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC021451.1-201ENST00000523498 1129 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC8P31273 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC087894.1-201ENST00000538359 518 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC063950.1-201ENST00000552036 308 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC124068.1-201ENST00000563131 678 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC107982.3-201ENST00000584957 985 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC008507.2-201ENST00000588402 1176 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AL592436.1-201ENST00000605135 558 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC112220.2-201ENST00000605513 533 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 DUXAP10-204ENST00000612052 616 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC093875.1-201ENST00000623688 504 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HOXC8P31273 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 FAM91A3P-201ENST00000456826 2544 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HOXC8P31273 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC8P31273 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC8P31273 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
HOXC8P31273 MAPK10-349ENST00000641767 3661 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 NSRP1P1-201ENST00000444067 1693 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 RNA5SP124-201ENST00000362739 110 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 RNU6-354P-201ENST00000383862 107 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 RNU6-610P-201ENST00000384264 107 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC8P31273 TCEA1P2-201ENST00000420496 906 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC8P31273 MTCYBP15-201ENST00000433123 1127 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 RPS4XP4-201ENST00000443195 763 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC8P31273 AC073587.1-201ENST00000447093 876 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 RPS11P1-201ENST00000451072 473 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 BX248409.1-201ENST00000455497 255 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC104689.1-201ENST00000473356 768 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC8P31273 RPS4XP15-201ENST00000489210 795 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC8P31273 SUMO2P5-201ENST00000506790 245 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.49□□□□□ -1.69
HOXC8P31273 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC8P31273 AC074029.1-201ENST00000552531 1044 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC8P31273 RPL21P7-201ENST00000557463 483 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 AC023825.1-201ENST00000566704 1030 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC120057.2-201ENST00000571520 271 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.49□□□□□ -1.69
HOXC8P31273 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.49□□□□□ -1.69
HOXC8P31273 AC112230.1-201ENST00000604342 547 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC115621.1-201ENST00000604653 858 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 AL512427.1-201ENST00000618593 349 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC068787.1-201ENST00000623908 691 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 AL596275.2-204ENST00000641628 552 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 AL596275.2-206ENST00000641957 626 ntBASIC4.49□□□□□ -1.69
HOXC8P31273 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.49□□□□□ -1.69
HOXC8P31273 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HOXC8P31273 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms