Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD56.6-201ENST00000384569 71 ntBASIC6.59□□□□□ -1.35
RXRBP28702 RNU6-297P-201ENST00000384636 107 ntBASIC6.59□□□□□ -1.35
RXRBP28702 PTMAP2-201ENST00000397627 327 ntBASIC6.59□□□□□ -1.35
RXRBP28702 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.59□□□□□ -1.35
RXRBP28702 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.59□□□□□ -1.35
RXRBP28702 PDSS1P1-201ENST00000422953 1114 ntBASIC6.59□□□□□ -1.35
RXRBP28702 MTCO1P54-201ENST00000430139 712 ntBASIC6.59□□□□□ -1.35
RXRBP28702 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RXRBP28702 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.59□□□□□ -1.35
RXRBP28702 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.59□□□□□ -1.35
RXRBP28702 RPS5P7-201ENST00000456664 608 ntBASIC6.59□□□□□ -1.35
RXRBP28702 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.59□□□□□ -1.35
RXRBP28702 AL445687.2-201ENST00000458156 728 ntBASIC6.59□□□□□ -1.35
RXRBP28702 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.59□□□□□ -1.35
RXRBP28702 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RXRBP28702 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.59□□□□□ -1.35
RXRBP28702 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.59□□□□□ -1.35
RXRBP28702 MIR3671-201ENST00000580455 88 ntBASIC6.59□□□□□ -1.35
RXRBP28702 MIR4637-201ENST00000582405 84 ntBASIC6.59□□□□□ -1.35
RXRBP28702 AC005261.5-201ENST00000596280 355 ntBASIC6.59□□□□□ -1.35
RXRBP28702 AP005432.2-201ENST00000608162 586 ntBASIC6.59□□□□□ -1.35
RXRBP28702 AP005137.2-201ENST00000609238 400 ntBASIC6.59□□□□□ -1.35
RXRBP28702 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.59□□□□□ -1.35
RXRBP28702 CR381572.2-201ENST00000624852 397 ntBASIC6.59□□□□□ -1.35
RXRBP28702 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RXRBP28702 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
RXRBP28702 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
RXRBP28702 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RXRBP28702 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RXRBP28702 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RXRBP28702 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RXRBP28702 Y_RNA.302-201ENST00000364997 102 ntBASIC6.58□□□□□ -1.36
RXRBP28702 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 RNU1-13P-201ENST00000384499 162 ntBASIC6.58□□□□□ -1.36
RXRBP28702 RNU6-248P-201ENST00000410720 107 ntBASIC6.58□□□□□ -1.36
RXRBP28702 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.58□□□□□ -1.36
RXRBP28702 PTP4A1P1-201ENST00000420539 515 ntBASIC6.58□□□□□ -1.36
RXRBP28702 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.58□□□□□ -1.36
RXRBP28702 AL022238.1-201ENST00000442557 355 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AL157827.1-201ENST00000447622 132 ntBASIC6.58□□□□□ -1.36
RXRBP28702 PSPHP1-201ENST00000450062 261 ntBASIC6.58□□□□□ -1.36
RXRBP28702 BX322784.1-201ENST00000455793 1077 ntBASIC6.58□□□□□ -1.36
RXRBP28702 ACTG1P13-201ENST00000486987 1043 ntBASIC6.58□□□□□ -1.36
RXRBP28702 RPS4XP15-201ENST00000489210 795 ntBASIC6.58□□□□□ -1.36
RXRBP28702 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 PTGES3P3-201ENST00000511479 482 ntBASIC6.58□□□□□ -1.36
RXRBP28702 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 MIR4666A-201ENST00000580160 79 ntBASIC6.58□□□□□ -1.36
RXRBP28702 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 MTCO2P22-201ENST00000603246 681 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AC010680.3-201ENST00000604215 520 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AL162730.1-201ENST00000605734 292 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AC024560.3-201ENST00000608482 349 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AL023881.1-201ENST00000621088 301 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AC244100.1-202ENST00000621554 382 ntBASIC6.58□□□□□ -1.36
RXRBP28702 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.58□□□□□ -1.36
RXRBP28702 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RXRBP28702 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RXRBP28702 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.58□□□□□ -1.36
RXRBP28702 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
RXRBP28702 AC011933.2-201ENST00000578539 2790 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AC004158.1-201ENST00000564508 4319 ntBASIC6.57□□□□□ -1.36
RXRBP28702 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 AC109315.1-201ENST00000584143 1347 ntBASIC6.57□□□□□ -1.36
RXRBP28702 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.57□□□□□ -1.36
RXRBP28702 CR383658.2-201ENST00000547576 1525 ntBASIC6.57□□□□□ -1.36
RXRBP28702 A2MP1-204ENST00000566278 4130 ntBASIC6.57□□□□□ -1.36
RXRBP28702 5S_rRNA.1-201ENST00000364415 116 ntBASIC6.57□□□□□ -1.36
RXRBP28702 Y_RNA.311-201ENST00000365068 96 ntBASIC6.57□□□□□ -1.36
RXRBP28702 MIR483-201ENST00000385070 76 ntBASIC6.57□□□□□ -1.36
RXRBP28702 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 AL121977.1-201ENST00000401636 979 ntBASIC6.57□□□□□ -1.36
RXRBP28702 FCF1P10-201ENST00000407590 479 ntBASIC6.57□□□□□ -1.36
RXRBP28702 LINC00993-201ENST00000420453 540 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AC009237.2-201ENST00000421358 284 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AC008850.1-201ENST00000427546 362 ntBASIC6.57□□□□□ -1.36
RXRBP28702 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.57□□□□□ -1.36
RXRBP28702 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.57□□□□□ -1.36
RXRBP28702 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RXRBP28702 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
RXRBP28702 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms