Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RN7SL820P-201ENST00000616437 299 ntBASIC7.99□□□□□ -1.13
CD44P16070 AL596245.1-201ENST00000618994 362 ntBASIC7.99□□□□□ -1.13
CD44P16070 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
CD44P16070 CR392039.4-201ENST00000624968 501 ntBASIC7.99□□□□□ -1.13
CD44P16070 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
CD44P16070 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 AC020978.6-201ENST00000571197 3177 ntBASIC7.99□□□□□ -1.13
CD44P16070 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 MAPK10-383ENST00000642032 3390 ntBASIC7.99□□□□□ -1.13
CD44P16070 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.99□□□□□ -1.13
CD44P16070 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
CD44P16070 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CD44P16070 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 DDX10P2-201ENST00000417796 2614 ntBASIC7.98□□□□□ -1.13
CD44P16070 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 RNU1-85P-201ENST00000364127 164 ntBASIC7.98□□□□□ -1.13
CD44P16070 Y_RNA.286-201ENST00000364813 102 ntBASIC7.98□□□□□ -1.13
CD44P16070 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
CD44P16070 RNU6-1055P-201ENST00000391085 107 ntBASIC7.98□□□□□ -1.13
CD44P16070 MIR513C-201ENST00000401352 84 ntBASIC7.98□□□□□ -1.13
CD44P16070 RN7SKP254-201ENST00000410685 310 ntBASIC7.98□□□□□ -1.13
CD44P16070 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.98□□□□□ -1.13
CD44P16070 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.98□□□□□ -1.13
CD44P16070 AC073063.1-201ENST00000434352 607 ntBASIC7.98□□□□□ -1.13
CD44P16070 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.98□□□□□ -1.13
CD44P16070 RPS7P3-201ENST00000443360 580 ntBASIC7.98□□□□□ -1.13
CD44P16070 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC7.98□□□□□ -1.13
CD44P16070 RN7SL834P-201ENST00000461450 286 ntBASIC7.98□□□□□ -1.13
CD44P16070 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.98□□□□□ -1.13
CD44P16070 FOLH1B-202ENST00000529567 2145 ntBASIC7.98□□□□□ -1.13
CD44P16070 AC133555.2-201ENST00000550213 292 ntBASIC7.98□□□□□ -1.13
CD44P16070 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
CD44P16070 RN7SL366P-201ENST00000577957 292 ntBASIC7.98□□□□□ -1.13
CD44P16070 MIR5696-201ENST00000578474 85 ntBASIC7.98□□□□□ -1.13
CD44P16070 MIR3689C-201ENST00000581239 72 ntBASIC7.98□□□□□ -1.13
CD44P16070 SNORD113-5-201ENST00000607261 78 ntBASIC7.98□□□□□ -1.13
CD44P16070 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CD44P16070 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
CD44P16070 SHQ1P1-201ENST00000437111 1544 ntBASIC7.98□□□□□ -1.13
CD44P16070 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.98□□□□□ -1.13
CD44P16070 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
CD44P16070 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.97□□□□□ -1.13
CD44P16070 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.97□□□□□ -1.13
CD44P16070 AL445437.1-201ENST00000623157 3087 ntBASIC7.97□□□□□ -1.13
CD44P16070 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
CD44P16070 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 AC092821.2-201ENST00000545710 2042 ntBASIC7.97□□□□□ -1.13
CD44P16070 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 RNU4-7P-201ENST00000364758 141 ntBASIC7.97□□□□□ -1.13
CD44P16070 U8.8-201ENST00000365399 135 ntBASIC7.97□□□□□ -1.13
CD44P16070 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 Y_RNA.412-201ENST00000384001 104 ntBASIC7.97□□□□□ -1.13
CD44P16070 AL139039.1-201ENST00000401900 692 ntBASIC7.97□□□□□ -1.13
CD44P16070 AL034374.1-201ENST00000406329 351 ntBASIC7.97□□□□□ -1.13
CD44P16070 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.97□□□□□ -1.13
CD44P16070 GNAI2P2-201ENST00000417003 916 ntBASIC7.97□□□□□ -1.13
CD44P16070 MED15P9-201ENST00000424716 533 ntBASIC7.97□□□□□ -1.13
CD44P16070 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CD44P16070 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.97□□□□□ -1.13
CD44P16070 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.97□□□□□ -1.13
CD44P16070 AL354983.1-201ENST00000434580 906 ntBASIC7.97□□□□□ -1.13
CD44P16070 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.97□□□□□ -1.13
CD44P16070 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
CD44P16070 AC022795.1-201ENST00000473808 480 ntBASIC7.97□□□□□ -1.13
CD44P16070 RPL7AP10-201ENST00000481016 791 ntBASIC7.97□□□□□ -1.13
CD44P16070 AC091959.1-201ENST00000495857 238 ntBASIC7.97□□□□□ -1.13
CD44P16070 AL139099.1-201ENST00000497398 403 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms