Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AL121895.2-201ENST00000619558 447 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC067931.1-201ENST00000624190 671 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AL356121.2-201ENST00000624715 780 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 AC092159.4-201ENST00000624944 550 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC6P09630 MIR3974-201ENST00000637126 96 ntBASIC4.69□□□□□ -1.66
HOXC6P09630 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HOXC6P09630 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC6P09630 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 MTND4P10-201ENST00000446199 1363 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 SNORA73.2-201ENST00000364946 201 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXC6P09630 RNU6-224P-201ENST00000384055 107 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 Y_RNA.578-201ENST00000390903 88 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 RPL17P50-201ENST00000396131 546 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 AL590704.1-201ENST00000402856 794 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AL136310.1-201ENST00000404926 654 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 MIR1302-8-201ENST00000408342 128 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AL691449.1-201ENST00000426570 421 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXC6P09630 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 HMGB3P10-201ENST00000434734 572 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC084290.1-201ENST00000434995 374 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC006011.1-201ENST00000442758 349 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC068135.1-201ENST00000446164 246 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 PTENP1-201ENST00000447117 1215 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 RPL7L1P1-201ENST00000448259 785 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 PRSS3P4-201ENST00000453323 162 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AL445669.2-201ENST00000454425 421 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC6P09630 RN7SKP141-201ENST00000516167 338 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 SNORA31.13-201ENST00000516624 135 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 AC011611.5-201ENST00000552477 578 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC6P09630 SNORD39.2-201ENST00000579995 76 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC110760.3-201ENST00000598794 467 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AL592436.1-201ENST00000605135 558 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC007349.4-201ENST00000608114 532 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC009090.3-201ENST00000616553 565 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC010975.3-201ENST00000618727 978 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AC244100.1-202ENST00000621554 382 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 AP001005.3-201ENST00000622049 129 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXC6P09630 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXC6P09630 AC007342.7-201ENST00000624610 2337 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 SCN1A-220ENST00000641603 12506 ntBASIC4.68□□□□□ -1.66
HOXC6P09630 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXC6P09630 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC6P09630 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXC6P09630 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
HOXC6P09630 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXC6P09630 BMS1P3-201ENST00000372011 932 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 RNU6-761P-201ENST00000384148 107 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 RNU6-1263P-201ENST00000384601 106 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 VDAC2P1-201ENST00000399358 958 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 BTF3P8-201ENST00000414577 526 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXC6P09630 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXC6P09630 AL161631.1-201ENST00000417933 486 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 AC004448.2-201ENST00000422360 586 ntBASIC4.67□□□□□ -1.66
HOXC6P09630 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXC6P09630 USP9YP11-201ENST00000427537 717 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms