Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
ALDH1A1P00352 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 OR10R3P-201ENST00000361688 942 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 RNU6-38P-201ENST00000384085 107 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 RPS3AP38-201ENST00000435889 763 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC012075.1-201ENST00000436549 580 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC079781.2-201ENST00000446424 169 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AL161722.1-201ENST00000446972 1032 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AL935212.3-201ENST00000450729 284 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 RNU6-333P-201ENST00000459117 107 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC015724.1-201ENST00000478577 156 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 HIGD1AP14-201ENST00000507617 282 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 RPL39P5-202ENST00000512505 151 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 IGHV3-63-201ENST00000518422 341 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AL022099.1-201ENST00000604551 712 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC018690.1-201ENST00000608144 626 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AL445647.2-201ENST00000615170 130 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC068870.2-201ENST00000620635 389 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC092821.2-201ENST00000545710 2042 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 AC046144.1-201ENST00000478559 1853 ntBASIC6.92□□□□□ -1.3
ALDH1A1P00352 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
ALDH1A1P00352 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
ALDH1A1P00352 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
ALDH1A1P00352 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 Y_RNA.252-201ENST00000364556 101 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RNY1P14-201ENST00000384426 108 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RNU6-954P-201ENST00000411355 107 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 HMGA1P8-201ENST00000414130 321 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 AC007283.2-201ENST00000424739 197 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 AL139148.1-201ENST00000427122 680 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 AC006548.1-201ENST00000427470 102 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RPL7P4-203ENST00000430239 730 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 HMGB3P24-201ENST00000433260 622 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 AF228730.2-201ENST00000438784 848 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 HMGB3P11-201ENST00000440127 604 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 HSFY6P-201ENST00000445573 403 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RNU7-136P-201ENST00000458819 69 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RN7SL172P-201ENST00000460535 303 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RN7SL72P-201ENST00000460697 269 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 AC005532.2-201ENST00000467154 373 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RN7SL583P-201ENST00000475692 287 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 HMGB1P42-201ENST00000532126 553 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.91□□□□□ -1.3
ALDH1A1P00352 AC008126.1-201ENST00000549019 480 ntBASIC6.91□□□□□ -1.3
ALDH1A1P00352 RRN3P3-201ENST00000549207 578 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms