Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.88□□□□□ -1.79
PDLIM1O00151 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AC099489.2-201ENST00000574976 260 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.88□□□□□ -1.79
PDLIM1O00151 PCNAP1-202ENST00000595299 752 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 EIF1P6-201ENST00000600054 334 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AP000255.1-201ENST00000610276 676 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 uc_338.13-201ENST00000618243 179 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.88□□□□□ -1.79
PDLIM1O00151 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PDLIM1O00151 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
PDLIM1O00151 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 AC138915.3-201ENST00000562908 1389 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 AP001148.1-201ENST00000624124 2359 ntBASIC3.88□□□□□ -1.79
PDLIM1O00151 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDLIM1O00151 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.87□□□□□ -1.79
PDLIM1O00151 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 EIF2AP4-201ENST00000424793 1781 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
PDLIM1O00151 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM1O00151 ENSAP3-201ENST00000312710 333 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 OR4K17-201ENST00000315543 1032 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PDLIM1O00151 RNU6-543P-201ENST00000362576 108 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 MIR1179-201ENST00000408703 91 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 PGBD4P8-201ENST00000412993 562 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 LIPT1P1-201ENST00000415870 1186 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AL512637.2-201ENST00000431287 1256 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 CBX1P1-201ENST00000440184 427 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 RPS7P5-201ENST00000441482 581 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AC008565.1-201ENST00000509046 885 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AC104108.1-201ENST00000509930 412 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 RN7SKP60-201ENST00000516985 239 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 IGLVIV-65-201ENST00000517313 360 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.87□□□□□ -1.79
PDLIM1O00151 COX6B1P6-201ENST00000522347 255 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AL139174.1-201ENST00000531489 886 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 MIR4425-201ENST00000580572 84 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AC067852.4-201ENST00000590314 478 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.87□□□□□ -1.79
PDLIM1O00151 AP005229.2-201ENST00000609980 697 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 MIR378J-201ENST00000611988 109 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 STMN1P1-201ENST00000617809 440 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AL121890.3-201ENST00000618494 516 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 AC018816.2-201ENST00000621460 353 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.87□□□□□ -1.79
PDLIM1O00151 SEPT7P7-201ENST00000420492 1301 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 DCAF13P3-201ENST00000561147 1334 ntBASIC3.87□□□□□ -1.79
PDLIM1O00151 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDLIM1O00151 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AL592494.2-201ENST00000425455 1548 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AC138393.1-206ENST00000540997 1886 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PDLIM1O00151 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AC025125.1-201ENST00000624743 1922 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.86□□□□□ -1.79
PDLIM1O00151 RNU4-25P-201ENST00000410569 230 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC092745.2-202ENST00000411880 369 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.86□□□□□ -1.79
PDLIM1O00151 CHIAP3-201ENST00000423668 1133 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC011998.1-201ENST00000433403 117 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC096638.2-201ENST00000434965 711 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 SKP1P1-201ENST00000438081 489 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC006994.1-201ENST00000438212 839 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC068135.1-201ENST00000446164 246 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 PHBP16-201ENST00000446318 950 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 AP002884.2-201ENST00000471647 395 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.86□□□□□ -1.79
PDLIM1O00151 RPS29P19-201ENST00000479709 171 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC092902.1-201ENST00000486999 259 ntBASIC3.86□□□□□ -1.79
PDLIM1O00151 AC012170.1-201ENST00000495139 359 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms