Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RNU6ATAC-201ENST00000408749 126 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC105402.2-201ENST00000438503 358 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 ISCA1P2-201ENST00000438679 421 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AL353093.1-201ENST00000441292 436 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 RPS15AP29-201ENST00000445539 400 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC106707.2-201ENST00000484182 374 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 SNORA64.4-201ENST00000516632 81 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 RNU1-45P-201ENST00000517191 141 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 IGKV2-26-201ENST00000518305 343 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC106785.1-201ENST00000565935 262 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 BMS1P7-201ENST00000602440 1052 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AL391261.4-201ENST00000616012 481 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 AL034408.1-202ENST00000636088 415 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 HSPA8P19-201ENST00000505359 1517 ntBASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
TRAV27A0A087WT01 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 RPL7P26-201ENST00000333817 754 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 RNU1-70P-201ENST00000362618 164 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 SNORD56.3-201ENST00000363507 71 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 CRP-203ENST00000368111 512 ntTSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 RN7SKP202-201ENST00000410439 330 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC245291.1-201ENST00000419501 328 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC073464.3-201ENST00000422564 712 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 HSPD1P21-201ENST00000436541 245 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 TRMT10BP1-201ENST00000519377 943 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 FAM106CP-201ENST00000582212 507 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 ABI1P1-201ENST00000603375 1120 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AL096803.3-201ENST00000609032 532 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC022960.2-201ENST00000616300 666 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 SNORD39.4-201ENST00000620099 78 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC243312.2-201ENST00000623340 601 ntBASIC3□□□□□ -1.93
TRAV27A0A087WT01 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
TRAV27A0A087WT01 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRAV27A0A087WT01 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 SNORD6-201ENST00000365444 73 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RNA5SP44-201ENST00000410446 133 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 BX842559.1-201ENST00000419615 532 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 PTP4A1P5-201ENST00000420305 455 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RPS15AP6-201ENST00000420703 385 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AC012065.2-201ENST00000421295 375 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 BX890604.2-201ENST00000427883 474 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AC007389.2-201ENST00000434630 306 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RAB9AP5-201ENST00000437794 597 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RAB9AP2-201ENST00000443911 597 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RPL21P23-201ENST00000446654 460 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RPL26P28-201ENST00000451325 435 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RBMY2UP-201ENST00000453474 324 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 RPL9P32-201ENST00000464118 620 ntBASIC2.99□□□□□ -1.93
TRAV27A0A087WT01 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms