Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 AC005052.1-201ENST00000625181 2492 ntBASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 AC003102.1-202ENST00000563394 1796 ntBASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC01558Q9Y6Z2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC01558Q9Y6Z2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 AL121761.2-201ENST00000598007 1648 ntBASIC10.01□□□□□ -0.81
LINC01558Q9Y6Z2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms