Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLCA3PQ9Y6N3 KRT8P8-201ENST00000434750 1448 ntBASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 AC012618.2-201ENST00000428058 849 ntBASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCA3PQ9Y6N3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 C1QL1P1-201ENST00000568105 661 ntBASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 AF186192.3-201ENST00000583427 947 ntBASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 AC138932.1-201ENST00000534164 6830 ntBASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCA3PQ9Y6N3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 AC233702.5-201ENST00000584107 538 ntBASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 Z99916.2-201ENST00000604037 246 ntBASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLCA3PQ9Y6N3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms