Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 NOC2LP1-202ENST00000452600 2235 ntBASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 PTBP1P-201ENST00000554374 1601 ntBASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HHLA3Q9XRX5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 BX119927.1-201ENST00000636596 1552 ntBASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 AL390719.1-204ENST00000412397 1219 ntBASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 GUSBP6-202ENST00000438529 1198 ntBASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC14.1□□□□□ -0.15
HHLA3Q9XRX5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 AC091874.3-201ENST00000512672 1195 ntBASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 AC133041.1-202ENST00000642053 222 ntBASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HHLA3Q9XRX5 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HHLA3Q9XRX5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HHLA3Q9XRX5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
HHLA3Q9XRX5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HHLA3Q9XRX5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 AL138781.1-201ENST00000566567 1274 ntBASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 AC104771.1-201ENST00000603335 964 ntBASIC14.08□□□□□ -0.16
HHLA3Q9XRX5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms