Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CDK11AQ9UQ88 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.85■■■□□ 2.37
CDK11AQ9UQ88 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 BUB3-202ENST00000368859 667 ntTSL 3 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 AL450487.1-201ENST00000426799 995 ntBASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 NDUFV2-AS1-203ENST00000608008 779 ntBASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC29.84■■■□□ 2.37
CDK11AQ9UQ88 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CDK11AQ9UQ88 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 LINC01311-201ENST00000565162 1445 ntBASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 FXN-203ENST00000396366 922 ntTSL 2 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC29.82■■■□□ 2.36
CDK11AQ9UQ88 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 MIR4674-201ENST00000582457 87 ntBASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
CDK11AQ9UQ88 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 AC073314.1-201ENST00000568729 2216 ntBASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 CLEC4GP1-201ENST00000596555 870 ntBASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CDK11AQ9UQ88 AL512408.1-201ENST00000569378 2000 ntBASIC29.79■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms