Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXXC1Q9P0U4 AL117328.2-201ENST00000624617 1940 ntBASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CXXC1Q9P0U4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 AC133561.1-201ENST00000568600 2415 ntBASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 AC079781.3-201ENST00000449110 356 ntBASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXXC1Q9P0U4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 AP001271.2-201ENST00000624018 1556 ntBASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 AC034232.1-201ENST00000506026 1064 ntBASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CXXC1Q9P0U4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 TSPY19P-201ENST00000418461 509 ntBASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 TSPY18P-201ENST00000441642 509 ntBASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CXXC1Q9P0U4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms