Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ARHGEF4Q9NR80 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
ARHGEF4Q9NR80 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 UNC93B2-201ENST00000285383 730 ntBASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 AC010331.1-201ENST00000611423 582 ntBASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.22■□□□□ 0.83
ARHGEF4Q9NR80 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 KRT16P1-201ENST00000399124 1418 ntBASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 AP000525.1-201ENST00000608286 694 ntBASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.21■□□□□ 0.83
ARHGEF4Q9NR80 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 AC116562.4-201ENST00000641316 2276 ntBASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 AC079598.2-202ENST00000546624 1451 ntBASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 YBX1P10-201ENST00000444752 975 ntBASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ARHGEF4Q9NR80 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 RCN1P1-201ENST00000400413 996 ntBASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ARHGEF4Q9NR80 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms