Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L6-201ENST00000626483 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L1-201ENST00000627662 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L8-201ENST00000629013 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L3-201ENST00000630187 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L7-201ENST00000630678 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 DUX4L5-201ENST00000630834 1275 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 MIR2861-201ENST00000636310 90 ntBASIC17.5■□□□□ 0.39
HMG20AQ9NP66 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HMG20AQ9NP66 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 CCDC92B-201ENST00000575506 885 ntBASIC17.49■□□□□ 0.39
HMG20AQ9NP66 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HMG20AQ9NP66 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 ZNRF2P3-201ENST00000424200 374 ntBASIC17.48■□□□□ 0.39
HMG20AQ9NP66 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 RARRES2P11-201ENST00000635158 484 ntBASIC17.48■□□□□ 0.39
HMG20AQ9NP66 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.48■□□□□ 0.39
HMG20AQ9NP66 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.47■□□□□ 0.39
HMG20AQ9NP66 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HMG20AQ9NP66 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms