Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 AC036111.1-201ENST00000533973 1582 ntBASIC18.01■□□□□ 0.47
CHD8Q9HCK8 AC233702.3-201ENST00000578656 1387 ntBASIC18.01■□□□□ 0.47
CHD8Q9HCK8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 AC242852.2-201ENST00000615738 1807 ntBASIC18.01■□□□□ 0.47
CHD8Q9HCK8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 SART3-203ENST00000546611 1184 ntBASIC18.01■□□□□ 0.47
CHD8Q9HCK8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CHD8Q9HCK8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CHD8Q9HCK8 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 AC211486.1-202ENST00000416371 468 ntBASIC18■□□□□ 0.47
CHD8Q9HCK8 METTL21AP1-201ENST00000438852 635 ntBASIC18■□□□□ 0.47
CHD8Q9HCK8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CHD8Q9HCK8 AC211476.1-201ENST00000503899 468 ntBASIC18■□□□□ 0.47
CHD8Q9HCK8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18■□□□□ 0.47
CHD8Q9HCK8 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
CHD8Q9HCK8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18■□□□□ 0.47
CHD8Q9HCK8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18■□□□□ 0.47
CHD8Q9HCK8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18■□□□□ 0.47
CHD8Q9HCK8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18■□□□□ 0.47
CHD8Q9HCK8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18■□□□□ 0.47
CHD8Q9HCK8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18■□□□□ 0.47
CHD8Q9HCK8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18■□□□□ 0.47
CHD8Q9HCK8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18■□□□□ 0.47
CHD8Q9HCK8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 MIR4674-201ENST00000582457 87 ntBASIC17.99■□□□□ 0.47
CHD8Q9HCK8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 MIR7706-201ENST00000613747 67 ntBASIC17.99■□□□□ 0.47
CHD8Q9HCK8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.99■□□□□ 0.47
CHD8Q9HCK8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 AL117328.2-201ENST00000624617 1940 ntBASIC17.98■□□□□ 0.47
CHD8Q9HCK8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.98■□□□□ 0.47
CHD8Q9HCK8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms