Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL589743.5-201ENST00000616611 1050 ntBASIC23.68■■□□□ 1.38
UPF2Q9HAU5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 HR-201ENST00000312841 5351 ntTSL 5 BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
UPF2Q9HAU5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 NTF6G-201ENST00000591094 616 ntBASIC23.67■■□□□ 1.38
UPF2Q9HAU5 AC069236.1-201ENST00000604339 616 ntBASIC23.67■■□□□ 1.38
UPF2Q9HAU5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UPF2Q9HAU5 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 AC116351.2-201ENST00000606540 1585 ntBASIC23.66■■□□□ 1.38
UPF2Q9HAU5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 AC009113.1-201ENST00000570267 2443 ntBASIC23.66■■□□□ 1.38
UPF2Q9HAU5 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 AR-207ENST00000612010 3896 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.66■■□□□ 1.38
UPF2Q9HAU5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 AC008694.1-202ENST00000636953 945 ntBASIC23.65■■□□□ 1.38
UPF2Q9HAU5 AC068338.2-201ENST00000563278 1430 ntBASIC23.65■■□□□ 1.38
UPF2Q9HAU5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC23.65■■□□□ 1.38
UPF2Q9HAU5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 LETM1P2-201ENST00000597330 2178 ntBASIC23.64■■□□□ 1.38
UPF2Q9HAU5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
UPF2Q9HAU5 MIR638-201ENST00000385237 100 ntBASIC23.64■■□□□ 1.37
UPF2Q9HAU5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 ZNF815P-204ENST00000434898 1737 ntBASIC23.64■■□□□ 1.37
UPF2Q9HAU5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
UPF2Q9HAU5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms