Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AC005332.8-201ENST00000622750 2735 ntBASIC18.42■□□□□ 0.54
PIF1Q9H611 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.42■□□□□ 0.54
PIF1Q9H611 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.42■□□□□ 0.54
PIF1Q9H611 C2orf69P4-201ENST00000565394 541 ntBASIC18.42■□□□□ 0.54
PIF1Q9H611 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.42■□□□□ 0.54
PIF1Q9H611 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.42■□□□□ 0.54
PIF1Q9H611 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.42■□□□□ 0.54
PIF1Q9H611 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.42■□□□□ 0.54
PIF1Q9H611 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PIF1Q9H611 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.41■□□□□ 0.54
PIF1Q9H611 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.41■□□□□ 0.54
PIF1Q9H611 AC018553.1-201ENST00000616682 1458 ntBASIC18.41■□□□□ 0.54
PIF1Q9H611 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.41■□□□□ 0.54
PIF1Q9H611 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 CYP2T1P-201ENST00000432607 1285 ntBASIC18.41■□□□□ 0.54
PIF1Q9H611 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.41■□□□□ 0.54
PIF1Q9H611 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.41■□□□□ 0.54
PIF1Q9H611 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.41■□□□□ 0.54
PIF1Q9H611 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 IKBKGP1-201ENST00000612193 1073 ntBASIC18.41■□□□□ 0.54
PIF1Q9H611 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 AC009113.1-201ENST00000570267 2443 ntBASIC18.41■□□□□ 0.54
PIF1Q9H611 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PIF1Q9H611 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.41■□□□□ 0.54
PIF1Q9H611 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 AC007322.1-201ENST00000426983 750 ntBASIC18.4■□□□□ 0.54
PIF1Q9H611 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.4■□□□□ 0.54
PIF1Q9H611 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 AC069236.1-201ENST00000604339 616 ntBASIC18.4■□□□□ 0.54
PIF1Q9H611 AC080038.1-201ENST00000611274 1154 ntBASIC18.4■□□□□ 0.54
PIF1Q9H611 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 AC008694.1-202ENST00000636953 945 ntBASIC18.4■□□□□ 0.54
PIF1Q9H611 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 AC005082.1-201ENST00000413042 2259 ntBASIC18.4■□□□□ 0.54
PIF1Q9H611 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.4■□□□□ 0.54
PIF1Q9H611 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PIF1Q9H611 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PIF1Q9H611 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PIF1Q9H611 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.39■□□□□ 0.54
PIF1Q9H611 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 AC023632.3-201ENST00000521633 145 ntBASIC18.39■□□□□ 0.53
PIF1Q9H611 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PIF1Q9H611 AC092666.2-201ENST00000613287 246 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms