Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.3■■□□□ 1
POLR3FQ9H1D9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.3■■□□□ 1
POLR3FQ9H1D9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
POLR3FQ9H1D9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 AC097488.1-201ENST00000507834 756 ntBASIC21.29■■□□□ 1
POLR3FQ9H1D9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 FITM1-202ENST00000559294 800 ntBASIC21.29■■□□□ 1
POLR3FQ9H1D9 SLC25A1P4-201ENST00000567977 778 ntBASIC21.29■■□□□ 1
POLR3FQ9H1D9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.29■■□□□ 1
POLR3FQ9H1D9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
POLR3FQ9H1D9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.28■■□□□ 1
POLR3FQ9H1D9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 AC211429.1-201ENST00000415277 523 ntBASIC21.27■■□□□ 1
POLR3FQ9H1D9 CRYGFP-201ENST00000418459 633 ntBASIC21.27■■□□□ 1
POLR3FQ9H1D9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.27■■□□□ 1
POLR3FQ9H1D9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.27■■□□□ 1
POLR3FQ9H1D9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.27■■□□□ 1
POLR3FQ9H1D9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
POLR3FQ9H1D9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
POLR3FQ9H1D9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 AC133561.5-201ENST00000635547 218 ntBASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
POLR3FQ9H1D9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.25■□□□□ 0.99
POLR3FQ9H1D9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms