Protein–RNA interactions for Protein: Q9C029

TRIM7, E3 ubiquitin-protein ligase TRIM7, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM7Q9C029 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.48■□□□□ 0.87
TRIM7Q9C029 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRIM7Q9C029 AP006587.1-201ENST00000534129 1502 ntBASIC20.48■□□□□ 0.87
TRIM7Q9C029 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
TRIM7Q9C029 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TRIM7Q9C029 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 RNA5SP413-201ENST00000516373 109 ntBASIC20.46■□□□□ 0.87
TRIM7Q9C029 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM7Q9C029 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM7Q9C029 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRIM7Q9C029 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.45■□□□□ 0.87
TRIM7Q9C029 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 AC233263.1-201ENST00000578059 224 ntBASIC20.45■□□□□ 0.86
TRIM7Q9C029 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM7Q9C029 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM7Q9C029 TEX21P-204ENST00000641479 1693 ntBASIC20.45■□□□□ 0.86
TRIM7Q9C029 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 ZNF815P-204ENST00000434898 1737 ntBASIC20.44■□□□□ 0.86
TRIM7Q9C029 SDHAP1-207ENST00000440850 2000 ntBASIC20.44■□□□□ 0.86
TRIM7Q9C029 AC004408.2-201ENST00000623613 2777 ntBASIC20.44■□□□□ 0.86
TRIM7Q9C029 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM7Q9C029 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM7Q9C029 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 YBX1P10-201ENST00000444752 975 ntBASIC20.44■□□□□ 0.86
TRIM7Q9C029 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
TRIM7Q9C029 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms