Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 TERF1P1-201ENST00000311003 1181 ntBASIC18.7■□□□□ 0.58
SLC38A3Q99624 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 CCR12P-201ENST00000446203 998 ntBASIC18.7■□□□□ 0.58
SLC38A3Q99624 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 AC116562.4-202ENST00000641738 218 ntBASIC18.7■□□□□ 0.58
SLC38A3Q99624 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
SLC38A3Q99624 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SLC38A3Q99624 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 AL049597.2-201ENST00000565575 961 ntBASIC18.69■□□□□ 0.58
SLC38A3Q99624 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC38A3Q99624 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.69■□□□□ 0.58
SLC38A3Q99624 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC38A3Q99624 TCF3P1-201ENST00000423021 1937 ntBASIC18.68■□□□□ 0.58
SLC38A3Q99624 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC38A3Q99624 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC38A3Q99624 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 SLC25A1P2-201ENST00000430693 912 ntBASIC18.67■□□□□ 0.58
SLC38A3Q99624 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC38A3Q99624 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC38A3Q99624 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC38A3Q99624 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SLC38A3Q99624 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms