Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 FGFR3P6-201ENST00000457012 610 ntBASIC5.92□□□□□ -1.46
HMCN1Q96RW7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 BNIP3P18-201ENST00000593976 575 ntBASIC5.92□□□□□ -1.46
HMCN1Q96RW7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMCN1Q96RW7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AC025062.2-201ENST00000605477 670 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL117328.2-201ENST00000624617 1940 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL078644.1-201ENST00000609881 752 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 Z69720.1-201ENST00000601483 472 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL359881.2-201ENST00000602973 570 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 CCS-201ENST00000310190 942 ntTSL 5 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AC004832.2-201ENST00000426397 482 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 PON3-203ENST00000427422 894 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 ALG1L5P-201ENST00000482043 771 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 Z83851.2-201ENST00000609564 659 ntBASIC5.91□□□□□ -1.46
HMCN1Q96RW7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMCN1Q96RW7 AL139400.1-201ENST00000366220 510 ntBASIC5.9□□□□□ -1.46
HMCN1Q96RW7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 CD99-202ENST00000381180 530 ntTSL 2 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 AC074051.2-201ENST00000565115 352 ntBASIC5.9□□□□□ -1.46
HMCN1Q96RW7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMCN1Q96RW7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms