Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 AC093827.2-201ENST00000512654 315 ntBASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 CR392000.1-201ENST00000624770 1228 ntBASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 AP006294.2-201ENST00000641667 209 ntBASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 AL031985.4-201ENST00000642138 673 ntBASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.92■□□□□ 0.46
CTHRC1Q96CG8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 Z99916.2-201ENST00000604037 246 ntBASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 AP001412.1-201ENST00000608405 714 ntBASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.91■□□□□ 0.46
CTHRC1Q96CG8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 TSPY21P-201ENST00000433481 731 ntBASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 AC008550.1-201ENST00000511500 884 ntBASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 CD177P1-201ENST00000606252 935 ntBASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 AC113410.3-201ENST00000623366 203 ntBASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 AL049637.2-201ENST00000641778 930 ntBASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.9■□□□□ 0.46
CTHRC1Q96CG8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CTHRC1Q96CG8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTHRC1Q96CG8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTHRC1Q96CG8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 FAM197Y1-201ENST00000421178 764 ntBASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTHRC1Q96CG8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms