Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AC105036.2-201ENST00000569468 176 ntBASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AL050303.2-201ENST00000619798 666 ntBASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AL512353.2-201ENST00000448759 1962 ntBASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AC135050.7-201ENST00000624508 2218 ntBASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 AC079598.2-202ENST00000546624 1451 ntBASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC44A1Q8WWI5 KRT8P8-201ENST00000434750 1448 ntBASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC44A1Q8WWI5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SLC44A1Q8WWI5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 RPS2P52-201ENST00000469610 820 ntBASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC44A1Q8WWI5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 YBX1P10-201ENST00000444752 975 ntBASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 AC006557.6-201ENST00000623071 864 ntBASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 AC092437.1-201ENST00000624794 1048 ntBASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms