Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 MTDHP5-201ENST00000598980 586 ntBASIC17.48■□□□□ 0.39
CHD6Q8TD26 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 NSUN5P1-202ENST00000421140 1535 ntBASIC17.48■□□□□ 0.39
CHD6Q8TD26 NSUN5P2-203ENST00000457352 1529 ntBASIC17.48■□□□□ 0.39
CHD6Q8TD26 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHD6Q8TD26 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.48■□□□□ 0.39
CHD6Q8TD26 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 Z83836.1-201ENST00000624605 1642 ntBASIC17.47■□□□□ 0.39
CHD6Q8TD26 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 AC022494.1-201ENST00000466044 728 ntBASIC17.47■□□□□ 0.39
CHD6Q8TD26 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 AL008721.1-201ENST00000609964 604 ntBASIC17.47■□□□□ 0.39
CHD6Q8TD26 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 TUBB8P6-201ENST00000436895 1288 ntBASIC17.47■□□□□ 0.39
CHD6Q8TD26 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHD6Q8TD26 AC090616.6-201ENST00000582640 721 ntBASIC17.47■□□□□ 0.39
CHD6Q8TD26 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHD6Q8TD26 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 AC092474.2-201ENST00000424288 719 ntBASIC17.46■□□□□ 0.39
CHD6Q8TD26 AC002347.1-201ENST00000569543 541 ntBASIC17.46■□□□□ 0.39
CHD6Q8TD26 AC018553.1-201ENST00000616682 1458 ntBASIC17.46■□□□□ 0.39
CHD6Q8TD26 KRT8P41-201ENST00000533985 1514 ntBASIC17.46■□□□□ 0.39
CHD6Q8TD26 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.46■□□□□ 0.39
CHD6Q8TD26 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHD6Q8TD26 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
CHD6Q8TD26 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHD6Q8TD26 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHD6Q8TD26 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 AC127496.7-201ENST00000625110 1798 ntBASIC17.45■□□□□ 0.38
CHD6Q8TD26 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHD6Q8TD26 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHD6Q8TD26 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms