Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 AC092865.5-201ENST00000545435 363 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 TSPY22P-201ENST00000427496 604 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 AC138894.3-201ENST00000603787 634 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 AC012615.1-201ENST00000565797 1299 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 AL121772.3-201ENST00000610840 674 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 KRT16P6-202ENST00000425692 1426 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 HLA-A-201ENST00000376802 1334 ntBASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ALMS1Q8TCU4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 AC024243.1-201ENST00000609234 778 ntBASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 FEM1AP1-201ENST00000431297 1995 ntBASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 AF228730.7-201ENST00000641842 219 ntBASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 Z98882.1-201ENST00000622160 2253 ntBASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ALMS1Q8TCU4 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 REXO1L6P-202ENST00000619970 1078 ntBASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 AC244015.2-201ENST00000616358 1861 ntBASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 AC079776.4-201ENST00000511039 504 ntBASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ALMS1Q8TCU4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 SAPCD2P3-201ENST00000455031 850 ntBASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 KRT8P26-201ENST00000534154 1276 ntBASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 BX640515.1-201ENST00000617215 977 ntBASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 AL121912.1-201ENST00000603683 238 ntBASIC13.02□□□□□ -0.33
ALMS1Q8TCU4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms