Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 AC131212.4-201ENST00000623606 975 ntBASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAB42Q8N4Z0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 RPS2P55-201ENST00000397318 883 ntBASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 AC107956.1-201ENST00000494359 873 ntBASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 AC008550.1-201ENST00000511500 884 ntBASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 AL445675.2-201ENST00000620291 557 ntBASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB42Q8N4Z0 ZNF815P-204ENST00000434898 1737 ntBASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 KRT16P1-201ENST00000399124 1418 ntBASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.8■□□□□ 0.6
RAB42Q8N4Z0 AC125437.2-201ENST00000625180 2167 ntBASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 AL160286.2-201ENST00000567150 934 ntBASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 AC233702.5-201ENST00000584107 538 ntBASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 HLA-A-209ENST00000638375 975 ntBASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAB42Q8N4Z0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAB42Q8N4Z0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms