Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 CALM1-205ENST00000553542 877 ntTSL 5 BASIC28.69■■■□□ 2.18
ABCA6Q8N139 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA6Q8N139 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC28.68■■■□□ 2.18
ABCA6Q8N139 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC28.67■■■□□ 2.18
ABCA6Q8N139 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 TBCB-205ENST00000585746 875 ntTSL 3 BASIC28.67■■■□□ 2.18
ABCA6Q8N139 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
ABCA6Q8N139 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC28.67■■■□□ 2.18
ABCA6Q8N139 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
ABCA6Q8N139 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC28.67■■■□□ 2.18
ABCA6Q8N139 AL162741.1-201ENST00000565563 1558 ntBASIC28.67■■■□□ 2.18
ABCA6Q8N139 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 TSPY19P-201ENST00000418461 509 ntBASIC28.66■■■□□ 2.18
ABCA6Q8N139 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 TSPY18P-201ENST00000441642 509 ntBASIC28.66■■■□□ 2.18
ABCA6Q8N139 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 CIB2-208ENST00000560618 804 ntTSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 AC011498.5-201ENST00000592027 486 ntBASIC28.66■■■□□ 2.18
ABCA6Q8N139 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 GPALPP1-207ENST00000611650 899 ntBASIC28.66■■■□□ 2.18
ABCA6Q8N139 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 STK25-234ENST00000535007 2459 ntTSL 2 BASIC28.66■■■□□ 2.18
ABCA6Q8N139 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
ABCA6Q8N139 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 AC079602.3-201ENST00000623931 403 ntBASIC28.65■■■□□ 2.18
ABCA6Q8N139 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 SEC1P-202ENST00000473944 940 ntBASIC28.65■■■□□ 2.18
ABCA6Q8N139 AC106795.1-205ENST00000512851 1056 ntBASIC28.65■■■□□ 2.18
ABCA6Q8N139 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC28.65■■■□□ 2.18
ABCA6Q8N139 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
ABCA6Q8N139 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 GPAT2P1-201ENST00000444924 1672 ntBASIC28.64■■■□□ 2.18
ABCA6Q8N139 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
ABCA6Q8N139 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCA6Q8N139 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
ABCA6Q8N139 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
ABCA6Q8N139 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC28.64■■■□□ 2.17
ABCA6Q8N139 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC28.64■■■□□ 2.17
ABCA6Q8N139 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 HLA-F-220ENST00000434407 884 ntBASIC28.63■■■□□ 2.17
ABCA6Q8N139 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 KRT8P26-201ENST00000534154 1276 ntBASIC28.63■■■□□ 2.17
ABCA6Q8N139 BMF-207ENST00000559701 630 ntTSL 3 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 MPI-205ENST00000562606 1052 ntTSL 3 BASIC28.63■■■□□ 2.17
ABCA6Q8N139 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
ABCA6Q8N139 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms