Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC56Q8IYG6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 AC008550.1-201ENST00000511500 884 ntBASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 AC113410.3-201ENST00000623366 203 ntBASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 KRT16P1-201ENST00000399124 1418 ntBASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
LRRC56Q8IYG6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 CR392000.1-201ENST00000624770 1228 ntBASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 AC141586.3-201ENST00000562166 1838 ntBASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC56Q8IYG6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 AC131212.4-201ENST00000623606 975 ntBASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 AL049637.2-201ENST00000641778 930 ntBASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC56Q8IYG6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC56Q8IYG6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC56Q8IYG6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC56Q8IYG6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms