Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SCN4BQ8IWT1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 AC145285.6-201ENST00000604632 637 ntBASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
SCN4BQ8IWT1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 MFAP1P1-201ENST00000442257 1255 ntBASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 FAM210CP-201ENST00000445714 574 ntBASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 C2orf69P3-201ENST00000565542 1120 ntBASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN4BQ8IWT1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN4BQ8IWT1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN4BQ8IWT1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms