Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AL391422.3-201ENST00000603791 2761 ntBASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 CCR12P-201ENST00000446203 998 ntBASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AC069148.1-201ENST00000608741 768 ntBASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 AC005332.1-201ENST00000577698 1310 ntBASIC20.45■□□□□ 0.86
RNF135Q8IUD6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RNF135Q8IUD6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 HOMER2P1-201ENST00000455653 964 ntBASIC20.44■□□□□ 0.86
RNF135Q8IUD6 AL671277.2-201ENST00000458060 996 ntBASIC20.44■□□□□ 0.86
RNF135Q8IUD6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 AC131212.4-201ENST00000623606 975 ntBASIC20.44■□□□□ 0.86
RNF135Q8IUD6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 AP005212.1-201ENST00000581547 1997 ntBASIC20.44■□□□□ 0.86
RNF135Q8IUD6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.44■□□□□ 0.86
RNF135Q8IUD6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 AP000692.2-201ENST00000608391 879 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 AC130371.2-201ENST00000619443 611 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 AC012313.10-201ENST00000623509 926 ntBASIC20.43■□□□□ 0.86
RNF135Q8IUD6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RNF135Q8IUD6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms