Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NME6-213ENST00000451657 871 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 AC005829.2-201ENST00000571422 1056 ntBASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 MARS-234ENST00000630571 216 ntTSL 5 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 MARS-235ENST00000630803 183 ntTSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
MRPL55Q7Z7F7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 PKD1P1-201ENST00000458669 6805 ntBASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 MIR935-201ENST00000401179 91 ntBASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 RAP2CP1-201ENST00000605103 478 ntBASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.41□□□□□ -0.42
MRPL55Q7Z7F7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 AL032819.2-201ENST00000624543 2162 ntBASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 MIPEPP3-201ENST00000412105 444 ntBASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 DUSP5P2-201ENST00000426873 1033 ntBASIC12.4□□□□□ -0.42
MRPL55Q7Z7F7 CROCCP5-201ENST00000436658 830 ntBASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms