Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 AP002414.4-201ENST00000589764 1148 ntBASIC13.45□□□□□ -0.26
CSMD3Q7Z407 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CSMD3Q7Z407 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 HLA-F-220ENST00000434407 884 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 KRT18P31-201ENST00000506277 1292 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 MIR4674-201ENST00000582457 87 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 AL391422.3-201ENST00000603791 2761 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 AL117328.2-201ENST00000624617 1940 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 AL691432.2-201ENST00000607222 2038 ntBASIC13.44□□□□□ -0.26
CSMD3Q7Z407 BID-212ENST00000614949 1988 ntTSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.44□□□□□ -0.26
CSMD3Q7Z407 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AC011498.5-201ENST00000592027 486 ntBASIC13.43□□□□□ -0.26
CSMD3Q7Z407 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 TSPY12P-201ENST00000421279 868 ntBASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.43□□□□□ -0.26
CSMD3Q7Z407 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 HLA-A-201ENST00000376802 1334 ntBASIC13.42□□□□□ -0.26
CSMD3Q7Z407 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CSMD3Q7Z407 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms