Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
CTR9Q6PD62 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTR9Q6PD62 AP005242.2-201ENST00000580065 1175 ntBASIC22.95■■□□□ 1.26
CTR9Q6PD62 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.95■■□□□ 1.26
CTR9Q6PD62 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTR9Q6PD62 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CTR9Q6PD62 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ZNF815P-204ENST00000434898 1737 ntBASIC22.94■■□□□ 1.26
CTR9Q6PD62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CTR9Q6PD62 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 FAM207BP-201ENST00000447172 505 ntBASIC22.94■■□□□ 1.26
CTR9Q6PD62 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.94■■□□□ 1.26
CTR9Q6PD62 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.94■■□□□ 1.26
CTR9Q6PD62 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 CRYGFP-201ENST00000418459 633 ntBASIC22.93■■□□□ 1.26
CTR9Q6PD62 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 SLC25A1P4-201ENST00000567977 778 ntBASIC22.93■■□□□ 1.26
CTR9Q6PD62 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CTR9Q6PD62 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CTR9Q6PD62 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CTR9Q6PD62 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CTR9Q6PD62 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CTR9Q6PD62 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CTR9Q6PD62 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 AC096733.2-201ENST00000609937 1394 ntBASIC22.91■■□□□ 1.26
CTR9Q6PD62 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 NAPSB-206ENST00000562112 1266 ntBASIC22.91■■□□□ 1.26
CTR9Q6PD62 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 AC145285.6-201ENST00000604632 637 ntBASIC22.91■■□□□ 1.26
CTR9Q6PD62 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.91■■□□□ 1.26
CTR9Q6PD62 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CTR9Q6PD62 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CTR9Q6PD62 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CTR9Q6PD62 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms