Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 TUBB8P6-201ENST00000436895 1288 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 HNRNPDP1-201ENST00000439535 754 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 Z83836.1-201ENST00000624605 1642 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 AC084346.2-201ENST00000607097 949 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
RNF213Q63HN8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 ELK2BP-201ENST00000415014 1224 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 IGHV3-47-201ENST00000425060 335 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 HS6ST1P1-201ENST00000481504 1234 ntBASIC10.34□□□□□ -0.75
RNF213Q63HN8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
RNF213Q63HN8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AL157888.1-201ENST00000631930 593 ntBASIC10.33□□□□□ -0.76
RNF213Q63HN8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 HLA-F-220ENST00000434407 884 ntBASIC10.33□□□□□ -0.76
RNF213Q63HN8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 PTBP1P-201ENST00000554374 1601 ntBASIC10.33□□□□□ -0.76
RNF213Q63HN8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 MIR770-201ENST00000390219 98 ntBASIC10.33□□□□□ -0.76
RNF213Q63HN8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 RPS2P1-201ENST00000434010 821 ntBASIC10.33□□□□□ -0.76
RNF213Q63HN8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
RNF213Q63HN8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
RNF213Q63HN8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 BAD-202ENST00000394531 631 ntTSL 3 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 TFP1-202ENST00000475455 1573 ntBASIC10.32□□□□□ -0.76
RNF213Q63HN8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 AC009533.2-201ENST00000543664 586 ntBASIC10.32□□□□□ -0.76
RNF213Q63HN8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RNF213Q63HN8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.32□□□□□ -0.76
RNF213Q63HN8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms