Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 C1QL1P1-201ENST00000568105 661 ntBASIC23.05■■□□□ 1.28
RNF20Q5VTR2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNF20Q5VTR2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 TEX21P-204ENST00000641479 1693 ntBASIC23.04■■□□□ 1.28
RNF20Q5VTR2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 AC073648.6-201ENST00000641589 218 ntBASIC23.04■■□□□ 1.28
RNF20Q5VTR2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.04■■□□□ 1.28
RNF20Q5VTR2 LINC01465-201ENST00000408887 1940 ntBASIC23.04■■□□□ 1.28
RNF20Q5VTR2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 RN7SL471P-201ENST00000580476 299 ntBASIC23.03■■□□□ 1.28
RNF20Q5VTR2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNF20Q5VTR2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 POU5F1P3-201ENST00000428824 1078 ntBASIC23.02■■□□□ 1.28
RNF20Q5VTR2 KRT16P5-201ENST00000455284 522 ntBASIC23.02■■□□□ 1.28
RNF20Q5VTR2 AC133681.1-201ENST00000465482 601 ntBASIC23.02■■□□□ 1.28
RNF20Q5VTR2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 AP000974.1-201ENST00000623909 2387 ntBASIC23.02■■□□□ 1.28
RNF20Q5VTR2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC23.02■■□□□ 1.28
RNF20Q5VTR2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AC087289.5-201ENST00000586076 3175 ntBASIC23.01■■□□□ 1.27
RNF20Q5VTR2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AC120498.9-201ENST00000339021 3867 ntBASIC23.01■■□□□ 1.27
RNF20Q5VTR2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 AC124016.1-201ENST00000609552 612 ntBASIC23.01■■□□□ 1.27
RNF20Q5VTR2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF20Q5VTR2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms