Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 AC002347.1-201ENST00000569543 541 ntBASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 MTDHP5-201ENST00000598980 586 ntBASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL13A1Q5TAT6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
COL13A1Q5TAT6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 AC023274.1-201ENST00000418278 595 ntBASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
COL13A1Q5TAT6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 RPS2P28-201ENST00000314255 741 ntBASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 AL391807.1-203ENST00000604392 2365 ntBASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
COL13A1Q5TAT6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 MIR4745-201ENST00000577608 62 ntBASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 AC012645.4-201ENST00000610691 1061 ntBASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
COL13A1Q5TAT6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.77■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms