Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 BX664615.1-201ENST00000443558 458 ntBASIC20.45■□□□□ 0.86
VARS2Q5ST30 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 AL138966.2-201ENST00000621997 464 ntBASIC20.45■□□□□ 0.86
VARS2Q5ST30 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VARS2Q5ST30 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.44■□□□□ 0.86
VARS2Q5ST30 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 PRSS44-201ENST00000515154 1146 ntBASIC20.43■□□□□ 0.86
VARS2Q5ST30 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 NTF6B-201ENST00000591913 560 ntBASIC20.43■□□□□ 0.86
VARS2Q5ST30 ZNF815P-204ENST00000434898 1737 ntBASIC20.43■□□□□ 0.86
VARS2Q5ST30 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.43■□□□□ 0.86
VARS2Q5ST30 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VARS2Q5ST30 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.42■□□□□ 0.86
VARS2Q5ST30 WWOX-216ENST00000569818 525 ntBASIC20.42■□□□□ 0.86
VARS2Q5ST30 LINC01521-201ENST00000504184 1943 ntBASIC20.42■□□□□ 0.86
VARS2Q5ST30 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
VARS2Q5ST30 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.42■□□□□ 0.86
VARS2Q5ST30 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VARS2Q5ST30 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
VARS2Q5ST30 AK4P3-201ENST00000418260 669 ntBASIC20.41■□□□□ 0.86
VARS2Q5ST30 AC117947.1-201ENST00000427448 529 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms