Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 PCDHAC2-203ENST00000615316 3011 ntBASIC26.67■■□□□ 1.86
CDCA8Q53HL2 SDHAP1-207ENST00000440850 2000 ntBASIC26.67■■□□□ 1.86
CDCA8Q53HL2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 ECEL1P3-201ENST00000427961 737 ntBASIC26.67■■□□□ 1.86
CDCA8Q53HL2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDCA8Q53HL2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 TSPY14P-201ENST00000303979 915 ntBASIC26.66■■□□□ 1.86
CDCA8Q53HL2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 EGLN1P1-201ENST00000531623 762 ntBASIC26.66■■□□□ 1.86
CDCA8Q53HL2 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.66■■□□□ 1.86
CDCA8Q53HL2 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 KRT8P11-201ENST00000409686 1436 ntBASIC26.65■■□□□ 1.86
CDCA8Q53HL2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC26.65■■□□□ 1.86
CDCA8Q53HL2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 SLC25A1P2-201ENST00000430693 912 ntBASIC26.64■■□□□ 1.86
CDCA8Q53HL2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 CA15P1-201ENST00000481698 905 ntBASIC26.64■■□□□ 1.86
CDCA8Q53HL2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDCA8Q53HL2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CDCA8Q53HL2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDCA8Q53HL2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CDCA8Q53HL2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC26.64■■□□□ 1.85
CDCA8Q53HL2 AC073130.3-201ENST00000624389 2278 ntBASIC26.64■■□□□ 1.85
CDCA8Q53HL2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.64■■□□□ 1.85
CDCA8Q53HL2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 LINC01568-207ENST00000641790 1380 ntBASIC26.63■■□□□ 1.85
CDCA8Q53HL2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
CDCA8Q53HL2 KRT18P22-201ENST00000402024 1347 ntBASIC26.63■■□□□ 1.85
CDCA8Q53HL2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC26.62■■□□□ 1.85
CDCA8Q53HL2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms