Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCS1Q01581 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCS1Q01581 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 AL121829.2-201ENST00000620908 328 ntBASIC18.59■□□□□ 0.57
HMGCS1Q01581 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HMGCS1Q01581 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
HMGCS1Q01581 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS1Q01581 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS1Q01581 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.58■□□□□ 0.57
HMGCS1Q01581 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
HMGCS1Q01581 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS1Q01581 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HMGCS1Q01581 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.58■□□□□ 0.57
HMGCS1Q01581 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HMGCS1Q01581 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.58■□□□□ 0.56
HMGCS1Q01581 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 UNC93B4-201ENST00000505679 747 ntBASIC18.57■□□□□ 0.56
HMGCS1Q01581 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 KRT18P16-201ENST00000510337 1294 ntBASIC18.57■□□□□ 0.56
HMGCS1Q01581 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HMGCS1Q01581 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
HMGCS1Q01581 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HMGCS1Q01581 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HMGCS1Q01581 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms