Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN2P57739 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.07■□□□□ 0.64
CLDN2P57739 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN2P57739 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.07■□□□□ 0.64
CLDN2P57739 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 NTF6B-201ENST00000591913 560 ntBASIC19.07■□□□□ 0.64
CLDN2P57739 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CLDN2P57739 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN2P57739 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN2P57739 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN2P57739 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.07■□□□□ 0.64
CLDN2P57739 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLDN2P57739 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLDN2P57739 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLDN2P57739 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN2P57739 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLDN2P57739 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.06■□□□□ 0.64
CLDN2P57739 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN2P57739 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CLDN2P57739 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.06■□□□□ 0.64
CLDN2P57739 WWOX-216ENST00000569818 525 ntBASIC19.06■□□□□ 0.64
CLDN2P57739 AL023803.3-201ENST00000615559 522 ntBASIC19.06■□□□□ 0.64
CLDN2P57739 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 AC092338.2-201ENST00000568827 1415 ntBASIC19.06■□□□□ 0.64
CLDN2P57739 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN2P57739 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN2P57739 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.06■□□□□ 0.64
CLDN2P57739 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.06■□□□□ 0.64
CLDN2P57739 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLDN2P57739 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN2P57739 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CLDN2P57739 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CLDN2P57739 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN2P57739 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.05■□□□□ 0.64
CLDN2P57739 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLDN2P57739 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.05■□□□□ 0.64
CLDN2P57739 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 CKBP1-201ENST00000565489 1086 ntBASIC19.05■□□□□ 0.64
CLDN2P57739 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN2P57739 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CLDN2P57739 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.05■□□□□ 0.64
CLDN2P57739 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLDN2P57739 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLDN2P57739 PCDHAC2-203ENST00000615316 3011 ntBASIC19.05■□□□□ 0.64
CLDN2P57739 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN2P57739 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN2P57739 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.04■□□□□ 0.64
CLDN2P57739 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.04■□□□□ 0.64
CLDN2P57739 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CLDN2P57739 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLDN2P57739 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLDN2P57739 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms