Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CLDN6P56747 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.54■□□□□ 0.56
CLDN6P56747 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 TSPY21P-201ENST00000433481 731 ntBASIC18.54■□□□□ 0.56
CLDN6P56747 TSPY23P-201ENST00000440136 739 ntBASIC18.54■□□□□ 0.56
CLDN6P56747 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN6P56747 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN6P56747 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.54■□□□□ 0.56
CLDN6P56747 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.54■□□□□ 0.56
CLDN6P56747 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CLDN6P56747 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
CLDN6P56747 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CLDN6P56747 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN6P56747 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CLDN6P56747 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN6P56747 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.53■□□□□ 0.56
CLDN6P56747 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN6P56747 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.53■□□□□ 0.56
CLDN6P56747 AC008622.2-201ENST00000617006 1229 ntBASIC18.53■□□□□ 0.56
CLDN6P56747 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.53■□□□□ 0.56
CLDN6P56747 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CLDN6P56747 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CLDN6P56747 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CLDN6P56747 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN6P56747 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN6P56747 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CLDN6P56747 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CLDN6P56747 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN6P56747 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN6P56747 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.52■□□□□ 0.56
CLDN6P56747 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN6P56747 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.52■□□□□ 0.56
CLDN6P56747 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CLDN6P56747 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.52■□□□□ 0.56
CLDN6P56747 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CLDN6P56747 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN6P56747 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CLDN6P56747 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN6P56747 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.52■□□□□ 0.55
CLDN6P56747 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.52■□□□□ 0.55
CLDN6P56747 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN6P56747 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CLDN6P56747 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN6P56747 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.52■□□□□ 0.55
CLDN6P56747 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN6P56747 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN6P56747 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN6P56747 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN6P56747 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.51■□□□□ 0.55
CLDN6P56747 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 SPDYE15P-201ENST00000424157 909 ntBASIC18.51■□□□□ 0.55
CLDN6P56747 AC246785.2-201ENST00000432512 513 ntBASIC18.51■□□□□ 0.55
CLDN6P56747 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN6P56747 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN6P56747 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN6P56747 GCSHP2-201ENST00000560971 527 ntBASIC18.51■□□□□ 0.55
CLDN6P56747 AL136038.3-201ENST00000561909 1096 ntBASIC18.51■□□□□ 0.55
CLDN6P56747 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.51■□□□□ 0.55
CLDN6P56747 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN6P56747 HYMAI.1-201ENST00000620949 238 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms