Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CMC4P56277 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.4□□□□□ -0.1
CMC4P56277 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CMC4P56277 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.4□□□□□ -0.1
CMC4P56277 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.4□□□□□ -0.1
CMC4P56277 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 Z99916.2-201ENST00000604037 246 ntBASIC14.4□□□□□ -0.1
CMC4P56277 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.4□□□□□ -0.1
CMC4P56277 HLA-A-209ENST00000638375 975 ntBASIC14.4□□□□□ -0.1
CMC4P56277 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.4□□□□□ -0.1
CMC4P56277 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMC4P56277 ZNF815P-204ENST00000434898 1737 ntBASIC14.4□□□□□ -0.1
CMC4P56277 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.4□□□□□ -0.1
CMC4P56277 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMC4P56277 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.4□□□□□ -0.11
CMC4P56277 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CMC4P56277 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.39□□□□□ -0.11
CMC4P56277 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.39□□□□□ -0.11
CMC4P56277 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.39□□□□□ -0.11
CMC4P56277 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CMC4P56277 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CMC4P56277 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CMC4P56277 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMC4P56277 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CMC4P56277 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.38□□□□□ -0.11
CMC4P56277 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CMC4P56277 AC004951.3-201ENST00000418645 1148 ntBASIC14.38□□□□□ -0.11
CMC4P56277 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 FAM197Y1-201ENST00000421178 764 ntBASIC14.38□□□□□ -0.11
CMC4P56277 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.38□□□□□ -0.11
CMC4P56277 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CMC4P56277 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.38□□□□□ -0.11
CMC4P56277 NUDT16P1-203ENST00000513809 620 ntBASIC14.38□□□□□ -0.11
CMC4P56277 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.38□□□□□ -0.11
CMC4P56277 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 MIR4497-201ENST00000583208 89 ntBASIC14.38□□□□□ -0.11
CMC4P56277 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.38□□□□□ -0.11
CMC4P56277 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms