Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.35■■□□□ 1.01
CDK7P50613 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CDK7P50613 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.35■■□□□ 1.01
CDK7P50613 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.35■■□□□ 1.01
CDK7P50613 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
CDK7P50613 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.35■■□□□ 1.01
CDK7P50613 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDK7P50613 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.35■■□□□ 1.01
CDK7P50613 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDK7P50613 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK7P50613 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CDK7P50613 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.34■■□□□ 1.01
CDK7P50613 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.34■■□□□ 1.01
CDK7P50613 GCSHP2-201ENST00000560971 527 ntBASIC21.34■■□□□ 1.01
CDK7P50613 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
CDK7P50613 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK7P50613 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDK7P50613 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CDK7P50613 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.34■■□□□ 1.01
CDK7P50613 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.34■■□□□ 1.01
CDK7P50613 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK7P50613 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDK7P50613 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK7P50613 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK7P50613 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CDK7P50613 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDK7P50613 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDK7P50613 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.33■■□□□ 1.01
CDK7P50613 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.33■■□□□ 1.01
CDK7P50613 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.33■■□□□ 1.01
CDK7P50613 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.33■■□□□ 1.01
CDK7P50613 AC012313.10-201ENST00000623509 926 ntBASIC21.33■■□□□ 1.01
CDK7P50613 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.33■■□□□ 1.01
CDK7P50613 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDK7P50613 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.33■■□□□ 1
CDK7P50613 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDK7P50613 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDK7P50613 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDK7P50613 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.32■■□□□ 1
CDK7P50613 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.32■■□□□ 1
CDK7P50613 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.32■■□□□ 1
CDK7P50613 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.32■■□□□ 1
CDK7P50613 AP001271.2-201ENST00000624018 1556 ntBASIC21.32■■□□□ 1
CDK7P50613 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 LINC01311-201ENST00000565162 1445 ntBASIC21.32■■□□□ 1
CDK7P50613 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.32■■□□□ 1
CDK7P50613 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CDK7P50613 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.32■■□□□ 1
CDK7P50613 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.32■■□□□ 1
CDK7P50613 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.32■■□□□ 1
CDK7P50613 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.32■■□□□ 1
CDK7P50613 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.32■■□□□ 1
CDK7P50613 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDK7P50613 RNF165-205ENST00000588679 2904 ntBASIC21.32■■□□□ 1
CDK7P50613 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.32■■□□□ 1
CDK7P50613 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.31■■□□□ 1
CDK7P50613 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.31■■□□□ 1
CDK7P50613 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.31■■□□□ 1
CDK7P50613 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.31■■□□□ 1
CDK7P50613 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.31■■□□□ 1
CDK7P50613 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CDK7P50613 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.31■■□□□ 1
CDK7P50613 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.31■■□□□ 1
CDK7P50613 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDK7P50613 SPDYE13P-201ENST00000445314 798 ntBASIC21.31■■□□□ 1
CDK7P50613 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms