Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.77■■□□□ 1.08
HTTP42858 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HTTP42858 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.77■■□□□ 1.08
HTTP42858 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.77■■□□□ 1.08
HTTP42858 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HTTP42858 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HTTP42858 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.77■■□□□ 1.08
HTTP42858 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.77■■□□□ 1.08
HTTP42858 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HTTP42858 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.77■■□□□ 1.08
HTTP42858 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.77■■□□□ 1.08
HTTP42858 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.77■■□□□ 1.07
HTTP42858 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
HTTP42858 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.76■■□□□ 1.07
HTTP42858 FEM1AP4-201ENST00000443167 1987 ntBASIC21.76■■□□□ 1.07
HTTP42858 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.76■■□□□ 1.07
HTTP42858 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HTTP42858 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.76■■□□□ 1.07
HTTP42858 DRAXINP1-201ENST00000437611 948 ntBASIC21.76■■□□□ 1.07
HTTP42858 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.76■■□□□ 1.07
HTTP42858 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 AC022898.2-201ENST00000616822 1312 ntBASIC21.76■■□□□ 1.07
HTTP42858 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.76■■□□□ 1.07
HTTP42858 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
HTTP42858 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
HTTP42858 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 AL121912.1-201ENST00000603683 238 ntBASIC21.75■■□□□ 1.07
HTTP42858 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTTP42858 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTTP42858 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.75■■□□□ 1.07
HTTP42858 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.75■■□□□ 1.07
HTTP42858 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
HTTP42858 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.75■■□□□ 1.07
HTTP42858 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HTTP42858 AC093525.10-201ENST00000625130 1569 ntBASIC21.75■■□□□ 1.07
HTTP42858 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTTP42858 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HTTP42858 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.75■■□□□ 1.07
HTTP42858 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 AL355385.1-201ENST00000606123 409 ntBASIC21.75■■□□□ 1.07
HTTP42858 AF228730.7-201ENST00000641842 219 ntBASIC21.75■■□□□ 1.07
HTTP42858 KRT8P11-201ENST00000409686 1436 ntBASIC21.75■■□□□ 1.07
HTTP42858 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.75■■□□□ 1.07
HTTP42858 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
HTTP42858 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HTTP42858 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 AL590627.1-203ENST00000421194 1026 ntBASIC21.74■■□□□ 1.07
HTTP42858 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 AC034232.1-201ENST00000506026 1064 ntBASIC21.74■■□□□ 1.07
HTTP42858 AC091304.2-201ENST00000564639 760 ntBASIC21.74■■□□□ 1.07
HTTP42858 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HTTP42858 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 FEM1AP1-201ENST00000431297 1995 ntBASIC21.74■■□□□ 1.07
HTTP42858 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
HTTP42858 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.74■■□□□ 1.07
HTTP42858 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.74■■□□□ 1.07
HTTP42858 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HTTP42858 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HTTP42858 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HTTP42858 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.73■■□□□ 1.07
HTTP42858 FOSL1P1-201ENST00000511041 816 ntBASIC21.73■■□□□ 1.07
HTTP42858 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms